Accession
MI0019632
Description
Sarcophilus harrisii
sha-mir-200a precursor miRNA
Sequence
aaagaucacggcaaggucaucagugcugcuccagccccguggcacgaagugggccucugugggcaucuuacuagacagugcuggauuuuuggauguauucUAACACUGUCUGGUAACGAuguuuaaagagggaacccgacccggcaggug
......(((.((..((((....(((((((.........))))))).....((((((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).)))))...)))))))..))..)))
......(((.((..((((....(((((((.........))))))).....((((((((.(((((((((((((((((((((.((((.............)))).))))))))))))).)))))))).)))))...)))))))..))..)))
Structure
aaagau -g aa aucagugcugcuccagccccguggcacgaagu --- g - c uuuuu
cac gc gguc ggg ccucu ugggcauc uuacuagacagug ugga g
||| || |||| ||| ||||| |||||||| ||||||||||||| |||| g
gug cg ccag ccc ggaga auuuguAG AAUGGUCUGUCAC AUcu a
------ ga gc -------------------------------- aag a C A uaugu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL849763.1: 162393-162542 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sha-mir-200a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sha-miR-200a
| Accession | MIMAT0022805 |
| Description | Sarcophilus harrisii sha-miR-200a mature miRNA |
| Sequence | 101 - UAACACUGUCUGGUAACGA - 119 |
| Evidence |
experimental
Illumina [1] |
References
|
