miRBase entry: gma-MIR5772

Dead hairpin entry

Stem-loop gma-MIR5772


Accession
MI0019719
Description
Glycine max gma-MIR5772 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

2336 reads, 22.0 reads per million, 175 experiments
gucgcaagcaAGAAUGUGAGUUAGAGUGAGCAUCccuaaaaaaagaauuucaaauucuauauuuuugAGAGAAUUUGAAAUCCCACUauuuuagucugucgcaaccuaccuuacgacg
((((.(((..((..(((((..((((.((((.....((......)).((((((((((((.((....))..))))))))))))........)))).)))))))))..))..))).)))).

Structure
-    c   ca  AA     GU    G    CAUCccuaaaaaaaga            -a  u 
 gucg aag  AG  UGUGA  UAGA UGAG                auuucaaauucu  ua u
 |||| |||  ||  |||||  |||| ||||                ||||||||||||  ||  
 cagc uuc  uc  acgcu  gucu auuu                UAAAGUUUAAGA  gu u
g    a   ca  ca     --    g    --------uaUCACCC            GA  u