Stem-loop hco-mir-234

Accession

MI0020047

Description

Haemonchus contortus hco-mir-234 precursor miRNA

Sequence

ugucgauauauggcggacgguauucaagugcuaauaauacgccauuacgauAUUAUUGCUCGAGAAUACCCGUcgcccacgac
.((((.....(((..((((((((((..(.((.(((((((((......)).))))))))).)..))))).)))))..)))))))

Structure

u    auaua   cg     -     aa u  u       -  cc 
 gucg     ugg  gacgg uauuc  g gc aauaaua cg  a
 ||||     |||  ||||| |||||  | || ||||||| ||   
 cagc     acc  cUGCC AUAAG  C CG UUAUUAu gc  u
-    -----   cg     C     AG U  -       a  au 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-234

• Accession: MIMAT0023375
• Description: Haemonchus contortus hco-miR-234 mature miRNA
• Sequence: 52 - AUUAUUGCUCGAGAAUACCCGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4