Stem-loop hco-mir-5915

Accession

MI0020056

Description

Haemonchus contortus hco-mir-5915 precursor miRNA

Sequence

aaguacauuuUUAAGUAGUGACGCCAUUGUAAcgauuuuuggcuuacauuuggcuuacugcuuaggaauguuuucau
....(((((((((((((((((.((((.((((((.(....).).)))))..)))))))))))))))))))))......

Structure

--aagu                 C    -U     - g u 
      acauuuUUAAGUAGUGA GCCA  UGUAA c a u
      ||||||||||||||||| ||||  ||||| | |  
      uguaaggauucgucauu cggu  acauu g u u
uacuuu                 -    uu     c g u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5915

• Accession: MIMAT0023384
• Description: Haemonchus contortus hco-miR-5915 mature miRNA
• Sequence: 11 - UUAAGUAGUGACGCCAUUGUAA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4