Stem-loop hco-mir-5927

Accession

MI0020078

Description

Haemonchus contortus hco-mir-5927 precursor miRNA

Sequence

cgccccucaacgcuaaaccccgCCCACUCAAUAAACAAUUCGUguagaaggauagcgauccauuaaaaccgcuauuuuucuauaugaauuguuuauuaagugggcggguu
.((........)).....((((((((((.((((((((((((((((((((((((((((............)))))))))))))))))))))))))))).))))))))))..

Structure

cgccccucaacgcuaaac          C                            aucca 
                  cccgCCCACU AAUAAACAAUUCGUguagaaggauagcg     u
                  |||||||||| ||||||||||||||||||||||||||||      
                  gggcggguga uuauuuguuaaguauaucuuuuuaucgc     u
----------------uu          a                            caaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5927

• Accession: MIMAT0023408
• Description: Haemonchus contortus hco-miR-5927 mature miRNA
• Sequence: 23 - CCCACUCAAUAAACAAUUCGU - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4