Stem-loop hco-mir-5928a

Accession

MI0020081

Description

Haemonchus contortus hco-mir-5928a precursor miRNA

Sequence

gccuaucauuugggcccaaauuUGAAGUAGAGUAGAUUUGUAGGAUCaguugacccuacugaaccgcucuacuucgaguuugugccccgaaaauuggcgucauaggcgua
((((((.....((((.(((((((((((((((((.(.((.(((((.((....)).))))).)).).))))))))))))))))).))))((........))..))))))...

Structure

---      ---------cauuu    c                 A A  U     A  a 
   gccuau              gggc caaauuUGAAGUAGAGU G UU GUAGG UC g
   ||||||              |||| ||||||||||||||||| | || ||||| ||  
   cggaua              cccg guuugagcuucaucucg c ag caucc ag u
aug      cugcgguuaaaagc    u                 c a  u     c  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5928a

• Accession: MIMAT0023412
• Description: Haemonchus contortus hco-miR-5928a mature miRNA
• Sequence: 23 - UGAAGUAGAGUAGAUUUGUAGGAUC - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4