Stem-loop hco-mir-5918c

Accession

MI0020091

Description

Haemonchus contortus hco-mir-5918c precursor miRNA

Sequence

cccccuugcugaugggauaacgggUAAUACGAUUAUGAGGCAAGCUuuuucaaaagcuagccuauacaucguguuacccauugucucaccuccguuggaccuu
...((..((.((((((((((.((((((((((((....((((.((((((....)))))).))))....)))))))))))).))))))))..)).)).)).....

Structure

--ccc  uu  u  --        c            UAUG    A      u 
     cc  gc ga  ugggauaa gggUAAUACGAU    AGGC AGCUuu u
     ||  || ||  |||||||| ||||||||||||    |||| ||||||  
     gg  ug cu  acucuguu cccauugugcua    uccg ucgaaa c
uucca  -u  c  cc        a            caua    a      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5918c

• Accession: MIMAT0023422
• Description: Haemonchus contortus hco-miR-5918c mature miRNA
• Sequence: 25 - UAAUACGAUUAUGAGGCAAGCU - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4