Stem-loop hco-mir-5944

Accession

MI0020112

Description

Haemonchus contortus hco-mir-5944 precursor miRNA

Sequence

ucggaucccaugcaaaagggccuucacaugggaaucuucugacaUGAAAGGUCCUAUGUGUGGGGCACaaggauguac
..(..(((((((((..((((((((((..(.(((....))).)..)).)))))))).)))))))))..)..........

Structure

--------uc ga         aa        -  ca g   a 
          g  ucccaugca  agggccuu ca  u gga u
          |  |||||||||  |||||||| ||  | |||  
          C  GGGGUGUGU  UCCUGGAA GU  a ucu c
cauguaggaa AC         -A        A  ac g   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature hco-miR-5944

• Accession: MIMAT0023443
• Description: Haemonchus contortus hco-miR-5944 mature miRNA
• Sequence: 45 - UGAAAGGUCCUAUGUGUGGGGCAC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4