Stem-loop hco-mir-5974

Accession

MI0020150

Description

Haemonchus contortus hco-mir-5974 precursor miRNA

Sequence

uuuagcgucgaucaccaucuucugccaucgaaacugauucucuucggaaaccaaagAGAAUCAGUUUCGAUUGCAGAAgauggugauaggauacuguuga
..(((.(((.(((((((((((((((.((((((((((((((((((.((...)).)))))))))))))))))).)))))))))))))))..))).)))....

Structure

--uu   c   -g               c                  c  a 
    uag guc  aucaccaucuucugc aucgaaacugauucucuu gg  
    ||| |||  ||||||||||||||| |||||||||||||||||| || a
    guc uag  uagugguagAAGACG UAGCUUUGACUAAGAgaa cc  
aguu   a   ga               U                  a  a 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-5974

• Accession: MIMAT0023482
• Description: Haemonchus contortus hco-miR-5974 mature miRNA
• Sequence: 57 - AGAAUCAGUUUCGAUUGCAGAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4