Stem-loop ptr-mir-1260b

Accession

MI0020613

Description

Pan troglodytes ptr-mir-1260b precursor miRNA

Sequence

gcggcugcugcucuccguuuAUCCCACCACUGCCACCAUuauugcuacuguucagcaggugcugcugguggugauggugauagucuggugggggcgguggggcugcug
.((((.(((.(...((((...(((((((((((.((((((((((((.......((((((...)))))))))))))))))).))))..))))))))))).).))).))))

Structure

g    u   g ucu    uuA       --    C            uacuguu      g 
 cggc gcu c   ccgu   UCCCACC  ACUG CACCAUuauugc       cagcag  
 |||| ||| |   ||||   |||||||  |||| ||||||||||||       |||||| u
 gucg cgg g   ggcg   ggggugg  ugau gugguaguggug       gucguc  
-    u   g --u    ---       uc    a            -------      g 

Annotation confidence Not enough data

Genome context

chr11: 96423279-96423386 [+]

Mature ptr-miR-1260b

• Accession: MIMAT0024066
• Description: Pan troglodytes ptr-miR-1260b mature miRNA
• Sequence: 21 - AUCCCACCACUGCCACCAU - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116