miRBase entry: ggo-mir-379

Stem-loop ggo-mir-379

Accession

MI0020657

Description

Gorilla gorilla ggo-mir-379 precursor miRNA

Sequence

uuccgugguuccugaagagaUGGUAGACUAUGGAACGUAGGcguuaugauuucugaccuauguaacaugguccacuaacucucaguauccaauccauccucggagggcu
((((((((...((((.(((.((((.(((((((..(((((((((..........)).)))))))..))))))).)))).)))))))...))).........)))))....

Structure

----     ---------   uuc    a   a    A       GA       -  uuau 
    uuccg         ugg   cuga gag UGGU GACUAUG  ACGUAGG cg    g
    |||||         |||   |||| ||| |||| |||||||  ||||||| ||     
    gaggc         acc   gacu cuc auca cugguac  uguaucc gu    a
ucgg     uccuaccua   uau    -   a    c       aa       a  cuuu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 85045381-85045489 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from ggo-mir-379

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-379

Accession	MIMAT0024110
Description	Gorilla gorilla ggo-miR-379 mature miRNA
Sequence	21 - UGGUAGACUAUGGAACGUAGG - 41
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116