miRBase entry: ggo-mir-27b

Stem-loop ggo-mir-27b

Accession

MI0020659

Description

Gorilla gorilla ggo-mir-27b precursor miRNA

Sequence

cccagcgaugaccucucuaacaaggugcagagcuuagcugauuggugaacagugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGCaccugaagagaagguga
..........((((((((....(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))..)))).))))..

Structure

cccagcgaug    -    aaca                 g    g       ugau   u 
          accu cucu    aggugcagagcuuagcu auug ugaacag    ugg  
          |||| ||||    ||||||||||||||||| |||| |||||||    ||| u
          ugga gaga    uccaCGUCUUGAAUCGG UGAC ACUUguu    gcc  
--------ag    a    --ag                 -    -       --uc   u

Annotation confidence Not enough data

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Genome context

chr9: 77106450-77106557 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ggo-mir-27b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-27b

Accession	MIMAT0024112
Description	Gorilla gorilla ggo-miR-27b mature miRNA
Sequence	71 - UUCACAGUGGCUAAGUUCUGC - 91
Evidence	experimental Illumina [1]

References

PubMed ID: 22453055
Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
"Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
"BMC Genomics (2012) 13:116