Stem-loop ggo-mir-542

Accession

MI0020778

Description

Gorilla gorilla ggo-mir-542 precursor miRNA

Sequence

ggaucggucaaggaugcacagaucucagacaucucggggaucaucaugucacgagauaccagugugcacuUGUGACAGAUUGAUAACUGAAAggucugggagccacucaucu
...........(((((......((((((((...((((..((((...(((((((((.(((....)))..)))))))))...))))..))))...))))))))......)))))

Structure

ggaucggucaa     cacaga        auc    gg    uca         -a   c 
           ggaug      ucucagac   ucgg  auca   ugucacgag  uac a
           |||||      ||||||||   ||||  ||||   |||||||||  |||  
           ucuac      agggucug   AGUC  UAGU   ACAGUGUuc  gug g
-----------     ucaccg        gAA    AA    UAG         ac   u 

Annotation confidence Not enough data

Genome context

chrX: 134596750-134596861 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from ggo-mir-542

Mature ggo-miR-542

• Accession: MIMAT0024231
• Description: Gorilla gorilla ggo-miR-542 mature miRNA
• Sequence: 71 - UGUGACAGAUUGAUAACUGAAA - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22453055
   Annotation of primate miRNAs by high throughput sequencing of small RNA libraries
   "Dannemann M, Nickel B, Lizano E, Burbano HA, Kelso J"
   "BMC Genomics (2012) 13:116