Stem-loop bta-mir-652

Accession

MI0021123

Description

Bos taurus bta-mir-652 precursor miRNA

Gene family

MIPF0000333; mir-652

Literature search

4 open access papers mention bta-mir-652
(13 sentences)

Sequence

3315 reads, 79 reads per million, 71 experiments

acgaauggcuaugcacugcacaacccuaggagagggugccauucacauagacuagaauugAAUGGCGCCACUAGGGUUGUGcagugcacaaccuacac
......((...((((((((((((((((((.....(((((((((((.............))))))))))).))))))))))))))))))...)).....

Structure

acgaau  cua                  gagag           cauag 
      gg   ugcacugcacaacccuag     ggugccauuca     a
      ||   ||||||||||||||||||     |||||||||||     c
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu     u
-cacau  aac                  ----A           uaaga 

Annotation confidence Not enough data

Genome context

chrX: 63688261-63688358 [+]

Mature bta-miR-652

• Accession: MIMAT0024578
• Description: Bos taurus bta-miR-652 mature miRNA
• Sequence: 61 - AAUGGCGCCACUAGGGUUGUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111