miRBase entry: bta-mir-2285k-1

Stem-loop bta-mir-2285k-1


Accession
MI0021135
Description
Bos taurus bta-mir-2285k-1 precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
11 open access papers mention bta-mir-2285k-1
(16 sentences)

Sequence

917 reads, 60 reads per million, 73 experiments
augggcaaaaaguuugcuuggauuuuucugugagauauuaugggAAAACCGGAAUGAACUUUUUGacuga
.(.(((((((((((((.((((.(((((((((((....)))))))))))))))..))))))))))).)).)

Structure
a g  -           -c    a           g 
 u gg caaaaaguuug  uugg uuuuucuguga a
 | || |||||||||||  |||| |||||||||||  
 a uc GUUUUUCAAGU  GGCC AAAAggguauu u
- g  a           AA    -           a 


Annotation confidence Not enough data
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Genome context
chr29: 10896396-10896465 [+]

Database links

Mature bta-miR-2285k

Accession MIMAT0024586
Description Bos taurus bta-miR-2285k mature miRNA
Sequence 45 - AAAACCGGAAUGAACUUUUUG - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21912509
    Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
    "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
    "Int J Biol Sci (2011) 7:1016-1026

  2. PubMed ID: 22298343
    Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
    Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
    J Cell Biochem (2012) 113:2098-2111