Stem-loop bta-mir-2285k-1

Accession

MI0021135

Description

Bos taurus bta-mir-2285k-1 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285k-1
(16 sentences)

Sequence

383688 reads, 149.0 reads per million, 311 experiments

augggcaAAAAGUUUGCUUGGAUUUUUCUgugagauauuaugggAAAACCGGAAUGAACUUUUUGacuga
.(.(((((((((((((.((((.(((((((((((....)))))))))))))))..))))))))))).)).)

Structure

a g  -           -C    A           g 
 u gg caAAAAGUUUG  UUGG UUUUUCUguga a
 | || |||||||||||  |||| |||||||||||  
 a uc GUUUUUCAAGU  GGCC AAAAggguauu u
- g  a           AA    -           a 

Annotation confidence High

Genome context

29: 10770074-10770143 [+]

Mature bta-miR-2285k-1-5p

• Accession: MIMAT0051025
• Description: Bos taurus bta-miR-2285k-1-5p mature miRNA
• Sequence: 8 - AAAAGUUUGCUUGGAUUUUUCU - 29
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285k-3p

• Accession: MIMAT0024586
• Description: Bos taurus bta-miR-2285k-3p mature miRNA
• Sequence: 45 - AAAACCGGAAUGAACUUUUUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111