Stem-loop bta-mir-6122

Accession

MI0021140

Description

Bos taurus bta-mir-6122 precursor miRNA

Sequence

40 reads, 6 reads per million, 14 experiments

gcaguuaccagUCAGUUGUACUUUAUCCAGUGCuaACUAUAUGAUGUAAACUGAACuauugg
.......((((((((((.(((.((((..(((....)))..)))).)))))))))....))))

Structure

gcaguua    ----      G   U    CC   G 
       ccag    UCAGUU UAC UUAU  AGU C
       ||||    |||||| ||| ||||  |||  
       gguu    AGUCAA AUG AGUA  UCA u
-------    auCA      -   U    UA   a 

Annotation confidence Not enough data

Genome context

chr11: 43660500-43660561 [+]

Mature bta-miR-6122-5p

• Accession: MIMAT0024594
• Description: Bos taurus bta-miR-6122-5p mature miRNA
• Sequence: 12 - UCAGUUGUACUUUAUCCAGUGC - 33
• Evidence: experimental ; Illumina [1]

Mature bta-miR-6122-3p

• Accession: MIMAT0024595
• Description: Bos taurus bta-miR-6122-3p mature miRNA
• Sequence: 36 - ACUAUAUGAUGUAAACUGAAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22298343
   Deep sequencing reveals predominant expression of miR-21 amongst the small non-coding RNAs in retinal microvascular endothelial cells
   Guduric-Fuchs J, O'Connor A, Cullen A, Harwood L, Medina RJ, O'Neill CL, Stitt AW, Curtis TM, Simpson DA
   J Cell Biochem (2012) 113:2098-2111