Stem-loop hbr-MIR6172

Accession

MI0021482

Description

Hevea brasiliensis hbr-MIR6172 precursor miRNA

Sequence

uaaauaaagaaacucuugccuaaaccugguccauuaugaauuuaaaacaaaaauauaugagaccuauauauuuaauagauaagucucaccaugucucuuguaucuugaauccaugaUGGACCGUGUUUAAGUAAGAAaac
.............((((((.(((((.((((((((((((.((((((.((((..((((.((((((.(((.(((...))).))).))))))..))))...))))...)))))).)))))))))))).))))).))))))....

Structure

uaaauaaagaaac      c     c            a      --a    -aa    -a      c   a   u 
             ucuugc uaaac ugguccauuaug auuuaa   acaa   auau  ugagac uau uau  
             |||||| ||||| |||||||||||| ||||||   ||||   ||||  |||||| ||| ||| u
             AGAAUG AUUUG GCCAGGUaguac uaaguu   uguu   ugua  acucug aua aua  
---------caaA      A     U            c      cua    cuc    cc      a   g   a 

Annotation confidence Not enough data

Genome context

AJJZ010735981.1: 42-181 [-]

Mature hbr-miR6172

• Accession: MIMAT0024792
• Description: Hevea brasiliensis hbr-miR6172 mature miRNA
• Sequence: 117 - UGGACCGUGUUUAAGUAAGAA - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22407387
   Genome-wide analysis of microRNAs in rubber tree (Hevea brasiliensis L.) using high-throughput sequencing
   "Lertpanyasampatha M, Gao L, Kongsawadworakul P, Viboonjun U, Chrestin H, Liu R, Chen X, Narangajavana J"
   "Planta (2012) 236:437-445