Stem-loop hsv1-mir-H26

Accession

MI0021816

Description

Herpes Simplex Virus 1 hsv1-mir-H26 precursor miRNA

Sequence

ucaggcuagcgcggcgggccugccguaguuucUGGCUCGGUGAGCGACGGUCcgguugcuugg
.(((((.(((.(((((.((.(((((.((((...))))))))).))..))..))))))))))).

Structure

u     u   g   --  -g  c     u    u 
 caggc agc cgg  cg  gc ugccg aguu  
 ||||| ||| |||  ||  || ||||| |||| c
 guucg uug gcC  GC  CG GUGGC UCGG  
g     -   -   UG  AG  A     -    U 

Annotation confidence Not enough data

Genome context

Unknown

Mature hsv1-miR-H26

• Accession: MIMAT0025022
• Description: Herpes Simplex Virus 1 hsv1-miR-H26 mature miRNA
• Sequence: 33 - UGGCUCGGUGAGCGACGGUC - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22661375
   A novel miRNA produced during lytic HSV-1 infection is important for efficient replication in tissue culture
   "Munson DJ, Burch AD"
   "Arch Virol (2012) 157:1677-1688