Stem-loop hbr-MIR156

Accession

MI0022052

Description

Hevea brasiliensis hbr-MIR156 precursor miRNA

Literature search

3 open access papers mention hbr-MIR156
(14 sentences)

Sequence

gggcacugguggugauguugUUGACAGAAGAUAGAGAGCacagaugaugauaugcaauuaauggacucugcaucucacuccuuugugcucucuaugcuucugucaucaccuucagcccu
((((..(((.(((((......(((((((((((((((((((((((.(((((.(((((............))))).))).)).)))))))))))))).)))))))))))))).))))))).

Structure

-    ac   u     uguugU         -              u  -   u     auuaa 
 gggc  ugg gguga      UGACAGAAG AUAGAGAGCacaga ga uga augca     u
 ||||  ||| |||||      ||||||||| |||||||||||||| || ||| |||||      
 cccg  acu ccacu      acugucuuc uaucucucguguuu cu acu uacgu     g
u    --   u     ------         g              c  c   c     cucag 

Annotation confidence Not enough data

Genome context

AJJZ010312785.1: 188-306 [+]

Mature hbr-miR156-5p

• Accession: MIMAT0025282
• Description: Hevea brasiliensis hbr-miR156-5p mature miRNA
• Sequence: 21 - UUGACAGAAGAUAGAGAGC - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22330773
   Identification of novel microRNAs in Hevea brasiliensis and computational prediction of their targets
   Gébelin V, Argout X, Engchuan W, Pitollat B, Duan C, Montoro P, Leclercq J
   BMC Plant Biol (2012) 12:18