Stem-loop ssc-mir-9-3

Accession

MI0022123

Description

Sus scrofa ssc-mir-9-3 precursor miRNA

Literature search

9 open access papers mention ssc-mir-9-3
(57 sentences)

Sequence

8130515 reads, 12565.0 reads per million, 204 experiments

cccguuucucUCUUUGGUUAUCUAGCUGUAUGagugccacagagccgucAUAAAGCUAGAUAACCGAAAGUAGAaaugacu
..(((((((((.(((((((((((((((.(((((..((......))..))))).))))))))))))))))).)))))))...

Structure

-cc       -  C               G     gu  ca 
   cguuucu cU UUUGGUUAUCUAGCU UAUGa  gc  c
   ||||||| || ||||||||||||||| |||||  ||   
   guaaAGA GA AAGCCAAUAGAUCGA AUAcu  cg  a
uca       U  -               A     gc  ag 

Annotation confidence Medium

Genome context

chr7: 59924193-59924273 [+]

Mature ssc-miR-9-5p

• Accession: MIMAT0025358
• Description: Sus scrofa ssc-miR-9-5p mature miRNA
• Sequence: 11 - UCUUUGGUUAUCUAGCUGUAUG - 32
• Evidence: experimental ; Illumina [1-2]

Mature ssc-miR-9-3-3p

• Accession: MIMAT0052588
• Description: Sus scrofa ssc-miR-9-3-3p mature miRNA
• Sequence: 50 - AUAAAGCUAGAUAACCGAAAGUAGA - 74
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100