Stem-loop ssc-mir-676-2

Accession

MI0022156

Description

Sus scrofa ssc-mir-676-2 precursor miRNA

Literature search

3 open access papers mention ssc-mir-676-2
(3 sentences)

Sequence

364800 reads, 194.0 reads per million, 194 experiments

aacgcgugaCUCUUCAAUCUCAGGACUCGCAuaauuagcagaaugCCGUCCUAAGGUUGUUGAGUUcugcguuucu
((((((.(((((..((((((.(((((..((((..........)))).))))).))))))..))))).))))))...

Structure

---      u     UU      C     UC    aauu 
   aacgcg gaCUC  CAAUCU AGGAC  GCAu    a
   |||||| |||||  |||||| |||||  ||||     
   uugcgu UUGAG  GUUGGA UCCUG  Cgua    g
ucu      c     UU      A     -C    agac 

Annotation confidence High

Genome context

Unknown

Mature ssc-miR-676-5p

• Accession: MIMAT0017382
• Description: Sus scrofa ssc-miR-676-5p mature miRNA
• Sequence: 10 - CUCUUCAAUCUCAGGACUCGCA - 31
• Evidence: experimental ; Illumina [2-3]

Mature ssc-miR-676-3p

• Accession: MIMAT0013943
• Description: Sus scrofa ssc-miR-676-3p mature miRNA
• Sequence: 46 - CCGUCCUAAGGUUGUUGAGUU - 66
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


2. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100