Stem-loop bta-mir-2285o-3

Accession

MI0022296

Description

Bos taurus bta-mir-2285o-3 precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

11 open access papers mention bta-mir-2285o-3
(16 sentences)

Sequence

5443 reads, 12 reads per million, 68 experiments

guuaggugggccaaaaaauuuguuuggguuuuucuguaagaugguauggaaAAACCCGAACGAACUUUUGGgcccaccuaa
.(((((((((((.((((.((((((((((((((((((((......)))))))))))))))))))).)))).)))))))))))

Structure

g           a    a                    ag 
 uuaggugggcc aaaa uuuguuuggguuuuucugua  a
 ||||||||||| |||| ||||||||||||||||||||   
 aauccacccgG UUUU AAGCAAGCCCAAAaagguau  u
-           G    C                    gg 

Annotation confidence Not enough data

Genome context

chr24: 33986931-33987011 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285o-3

Mature bta-miR-2285o

• Accession: MIMAT0025530
• Description: Bos taurus bta-miR-2285o mature miRNA
• Sequence: 52 - AAACCCGAACGAACUUUUGG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103