Stem-loop bta-mir-2285o-3

Accession

MI0022296

Description

Bos taurus bta-mir-2285o-3 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285o-3
(15 sentences)

Sequence

2154987 reads, 384.0 reads per million, 308 experiments

guuaggugggccAAAAAAUUUGUUUGGGUUUUUcuguaagaugguauggAAAAACCCGAACGAACUUUUgggcccaccuaa
.(((((((((((.((((.((((((((((((((((((((......)))))))))))))))))))).)))).)))))))))))

Structure

g           A    A                    ag 
 uuaggugggcc AAAA UUUGUUUGGGUUUUUcugua  a
 ||||||||||| |||| ||||||||||||||||||||   
 aauccacccgg UUUU AAGCAAGCCCAAAAAgguau  u
-           g    C                    gg 

Annotation confidence Medium

Genome context

24: 33510860-33510940 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285o-3

Mature bta-miR-2285o-3-5p

• Accession: MIMAT0050985
• Description: Bos taurus bta-miR-2285o-3-5p mature miRNA
• Sequence: 13 - AAAAAAUUUGUUUGGGUUUUU - 33
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285o-1-3p

• Accession: MIMAT0025530
• Description: Bos taurus bta-miR-2285o-1-3p mature miRNA
• Sequence: 50 - AAAAACCCGAACGAACUUUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026


2. PubMed ID: 23100578
   Profiling of differentially expressed microRNA and the bioinformatic target gene analyses in bovine fast- and slow-type muscles by massively parallel sequencing
   "Muroya S, Taniguchi M, Shibata M, Oe M, Ojima K, Nakajima I, Chikuni K"
   "J Anim Sci (2013) 91:90-103