Stem-loop ddi-mir-7100

Accession

MI0022951

Description

Dictyostelium discoideum ddi-mir-7100 precursor miRNA

Sequence

cauuauuuguaucauuauuguaucaucacuguuucauuauaauaaauaauaauaauaaaauuuuccaauauuuuuuuuuauuauuuaUUAUAAUGAAACGGUAAUGAUacaauaaugaugaaacagu
.........(((((((((((((((((.(((((((((((((((((((((((((....(((((........)))))...))))))))))))))))))))))))).))))))))))))))))).......

Structure

cauuauuug                 c                         uaau     uuu 
         uaucauuauuguaucau acuguuucauuauaauaaauaauaa    aaaau   c
         ||||||||||||||||| |||||||||||||||||||||||||    |||||    
         guaguaauaacaUAGUA UGGCAAAGUAAUAUUauuuauuauu    uuuua   c
--ugacaaa                 A                         -uuu     uaa 

Annotation confidence Not enough data

Genome context

DDB0232430: 5268473-5268599 [+]

Mature ddi-miR-7100

• Accession: MIMAT0028103
• Description: Dictyostelium discoideum ddi-miR-7100 mature miRNA
• Sequence: 88 - UUAUAAUGAAACGGUAAUGAU - 108
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 22875808
   MicroRNAs in Amoebozoa: deep sequencing of the small RNA population in the social amoeba Dictyostelium discoideum reveals developmentally regulated microRNAs
   "Avesson L, Reimegard J, Wagner EG, Soderbom F"
   "RNA (2012) 18:1771-1782