Stem-loop cme-MIR399e

Accession

MI0023186

Description

Cucumis melo cme-MIR399e precursor miRNA

Sequence

452 reads, 254.0 reads per million, 18 experiments

gcagaAGAGCUUCUCUCCAUUGGCAGGcgaauuaugguuuagcuuucauguccUGCCAAAGGAGAGUUGCCCUUcaucuagu
...((((.((..((((((.((((((((.....(((((........))))).)))))))).))))))..)).)))).......

Structure

----gca    A  UU      A        cgaau     uuu 
       gaAG GC  CUCUCC UUGGCAGG     uaugg   a
       |||| ||  |||||| ||||||||     |||||    
       cUUC CG  GAGAGG AACCGUcc     guacu   g
ugaucua    C  UU      A        ----u     uuc 

Annotation confidence High

Genome context

Unknown

Mature cme-miR399e-5p

• Accession: MIMAT0057844
• Description: Cucumis melo cme-miR399e-5p mature miRNA
• Sequence: 6 - AGAGCUUCUCUCCAUUGGCAGG - 27
• Evidence: experimental ; unknown

Mature cme-miR399e-3p

• Accession: MIMAT0026082
• Description: Cucumis melo cme-miR399e-3p mature miRNA
• Sequence: 54 - UGCCAAAGGAGAGUUGCCCUU - 74
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877