Stem-loop cme-MIR858

Accession

MI0023187

Description

Cucumis melo cme-MIR858 precursor miRNA

Sequence

cuuuugcUCUCGUUGUCUGUUCGACCUUgaauuuuucucaaaaacauagaaauauuauauauucagaacuuuuuuuuuuuuuuaucaauaaauaaauaaaauaaaacccucaauuuuggauggauucauugguagguuuagguagcagccgaaggacuauacau
((((.(((...((((((((.((.(((.(((((((.((.(((((.......(((((...)))))..((...((((.((((.(((((......))))).)))).))))...))..))))))).)))))))..))).))..))))))))))).))))..........

Structure

----------    u   CUC        -U  G   -U       u  u     acauagaaauauuauauauuca  acu    u    u     ca 
          cuuu gcU   GUUGUCUG  UC ACC  Ugaauuu uc caaaa                      ga   uuuu uuuu uuuau  a
          |||| |||   ||||||||  || |||  ||||||| || |||||                      ||   |||| |||| |||||   
          gaag cga   cgauggau  gg ugg  acuuagg ag guuuu                      cu   aaaa aaaa aaaua  u
uacauaucag    c   ---        uu  a   uu       u  -     --------------------aa  ccc    u    u     aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR858

• Accession: MIMAT0026083
• Description: Cucumis melo cme-miR858 mature miRNA
• Sequence: 8 - UCUCGUUGUCUGUUCGACCUU - 28
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877