Stem-loop cme-MIR845

Accession

MI0023188

Description

Cucumis melo cme-MIR845 precursor miRNA

Sequence

ugcuuaucacuuugcguacucagacgaucuaaauucuucaucagcauuuguugcuguuguuguuuuucugcuugaauacucaaucgcucuauguuuuucacuaucgaagauaugguagcuucugcaaauccacuuucaucucagaaacuuucuguuauagugcuucaaaucuuucuucgugcuucuucgccaucuucuucugcuuuaccaggauuuUCGCUCUGAUACCAAUAUGAUGgaacccgg
...((((((..(((.(((.((((((((...(((..(..((.(((((.....))))).))..)..)))....((((....))))..(((((((((((((.......)))))))))).)))...........((((...((..(((((...)))))..))))))................(.((......)))......(((((......)))))...))).)))))))))))..)))))).......

Structure

----ugc      cu   c   c     -   ---------------------------------------ucuaaauucuucaucagcauuuguugcuguuguuguuuuucugcuugaauacucaauc   -          ca 
       uuauca  uug gua ucaga cga                                                                                                 gcu cuauguuuuu  c
       ||||||  ||| ||| ||||| |||                                                                                                 ||| ||||||||||  u
       gGUAGU  AAC CAU AGUCU GCU                                                                                                 cga gguauagaag  a
ggcccaa      AU   -   -     C   uuuaggaccauuucgucuucuucuaccgcuucuucgugcuucuuucuaaacuucgugauauugucuuucaaagacucuacuuucaccuaaacgucuu   u          cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR845

• Accession: MIMAT0026084
• Description: Cucumis melo cme-miR845 mature miRNA
• Sequence: 217 - UCGCUCUGAUACCAAUAUGAUG - 238
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877