Stem-loop cme-MIR171i

Accession

MI0023189

Description

Cucumis melo cme-MIR171i precursor miRNA

Literature search

1 open access papers mention cme-MIR171i
(1 sentences)

Sequence

gaaggcguugaUUGAGCCGUUCCAAUAUCACAugagcaaguuggaaaucguuggaaucgaagcaaucggcagcggcgacaagaucuucaaggaaaucaagagauggguuguugggauugaaggaauugaaggauuggaggauggugggggagugauuugagaaggguucagagaggaagaa
.....(.((..(((((((.((((((.(((((.(...((.(((...((((.((.((.((....(((((..(((((((..((...((((..........))))..)).))))))).)))))...)).)).)).))))....)))..))...).)))))))).))).))))))).)).).....

Structure

gaagg g  ga       G   -   U     A gag  -a   -gga    g  g  a  gaag     gg       ga  aga    caag 
     c uu  UUGAGCC UUC CAA AUCAC u   ca  guu    aauc uu ga uc    caauc  cagcggc  ca   ucuu    g
     | ||  ||||||| ||| ||| ||||| |   ||  |||    |||| || || ||    |||||  |||||||  ||   ||||     
     g ag  gacuugg aag guu uagug g   gu  uag    uuag aa uu ag    guuag  guuguug  gu   agaa    a
aagaa g  -a       g   a   -     a ggg  gg   gagg    g  g  a  -gaa     -g       -g  -ag    cuaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR171i

• Accession: MIMAT0026085
• Description: Cucumis melo cme-miR171i mature miRNA
• Sequence: 12 - UUGAGCCGUUCCAAUAUCACA - 32
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877