Stem-loop cme-MIR164c

Accession

MI0023190

Description

Cucumis melo cme-MIR164c precursor miRNA

Literature search

1 open access papers mention cme-MIR164c
(1 sentences)

Sequence

35521 reads, 19074.0 reads per million, 26 experiments

aauucuuguUGGAGAAGCAGGGCACGUGCAaacucacccauuuucuaaacccuuugCACGUGCUCCCCUUCUCCAACAuggcuuc
...((.(((((((((((..(((((((((((((....................)))))))))))))..))))))))))).))....

Structure

-aau  u           CA             cucacccau 
    uc uguUGGAGAAG  GGGCACGUGCAaa         u
    || |||||||||||  |||||||||||||          
    gg ACAACCUCUUC  CUCGUGCACguuu         u
cuuc  u           CC             cccaaaucu 

Annotation confidence High

Genome context

Unknown

Mature cme-miR164c-5p

• Accession: MIMAT0026086
• Description: Cucumis melo cme-miR164c-5p mature miRNA
• Sequence: 10 - UGGAGAAGCAGGGCACGUGCA - 30
• Evidence: not_experimental

Mature cme-miR164c-3p

• Accession: MIMAT0057845
• Description: Cucumis melo cme-miR164c-3p mature miRNA
• Sequence: 57 - CACGUGCUCCCCUUCUCCAACA - 78
• Evidence: experimental ; unknown

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877