Stem-loop cme-MIR166i

Accession

MI0023195

Description

Cucumis melo cme-MIR166i precursor miRNA

Literature search

1 open access papers mention cme-MIR166i
(6 sentences)

Sequence

15272 reads, 6429.0 reads per million, 26 experiments

ugaggagaAUGGAAACUGGUUCGAGAACGUuuguauggaugaacauaaaaagagagucuuucauccgaacgaUCUCGGACCAGGCUUCAUUCUcgccagcu
((..(((((((((..(((((((((((.((((((.(((((.((...(......)...)).))))).)))))).)))))))))))..)))))))))..))...

Structure

---  ag         AA           A      u     u  aca aa 
   ug  gagaAUGGA  CUGGUUCGAGA CGUuug augga ga   u  a
   ||  |||||||||  ||||||||||| |||||| ||||| ||   |   
   ac  cUCUUACUU  GACCAGGCUCU gcaagc uacuu cu   a  a
ucg  cg         CG           a      c     u  gag ga 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR166i-5p

• Accession: MIMAT0057848
• Description: Cucumis melo cme-miR166i-5p mature miRNA
• Sequence: 9 - AUGGAAACUGGUUCGAGAACGU - 30
• Evidence: experimental ; unknown

Mature cme-miR166i-3p

• Accession: MIMAT0026091
• Description: Cucumis melo cme-miR166i-3p mature miRNA
• Sequence: 73 - UCUCGGACCAGGCUUCAUUCU - 93
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877