Stem-loop cme-MIR172c

Accession

MI0023229

Description

Cucumis melo cme-MIR172c precursor miRNA

Gene family

MIPF0000035; MIR172

Sequence

gcggguguagcaucuucaagauucacaacauaugcaaauauuaucgaaauaaaaauaauaugaugcucaaaaaucucaacuugAGAAUCUUGAUGAUGCUGCAUcagcaaucaa
((.(((((((((((.(((((((((.........(((.(((((((..........)))))))..)))((((..........))))))))))))).))))))))))).))......

Structure

------  g           u         acaacauaugcaaauauuaucgaaauaaaaauaauaugaugc    aaau 
      gc gguguagcauc ucaagauuc                                          ucaa    c
      || ||||||||||| |||||||||                                          ||||     
      cg cUACGUCGUAG AGUUCUAAG                                          Aguu    u
aacuaa  a           U         ------------------------------------------    caac 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR172c

• Accession: MIMAT0026125
• Description: Cucumis melo cme-miR172c mature miRNA
• Sequence: 84 - AGAAUCUUGAUGAUGCUGCAU - 104
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877