Stem-loop cme-MIR393b

Accession

MI0023241

Description

Cucumis melo cme-MIR393b precursor miRNA

Sequence

caggaagcaUCCAAAGGGAUCGCAUUGAUCccacuuuguagcaauuuuuucuguuucuuuuucuuuuuuuuuaccuuuucauguuuucuuuuuuacccucuucugcuauggaauuuggaucaugccaucucuuuggauuccuccugc
(((((.(.((((((((((((.((((.(((((...(((((((((............................................................)))))))))....))))))))).)))))))))))).).))))).

Structure

-     a c            C    U     -cac         auuuuuucuguuucuuuuucuuuuuuuuu 
 cagga g aUCCAAAGGGAU GCAU GAUCc    uuuguagca                             a
 ||||| | |||||||||||| |||| |||||    |||||||||                              
 guccu c uagguuucucua cgua cuagg    agguaucgu                             c
c     c u            c    -     uuua         cuucucccauuuuuucuuuuguacuuuuc 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR393b

• Accession: MIMAT0026137
• Description: Cucumis melo cme-miR393b mature miRNA
• Sequence: 10 - UCCAAAGGGAUCGCAUUGAUC - 30
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877