Stem-loop cme-MIR395a

Accession

MI0023245

Description

Cucumis melo cme-MIR395a precursor miRNA

Sequence

1972 reads, 1100.0 reads per million, 26 experiments

acuagaGUUCCCUUGAGCACUUCAUUGgaaaauuggaaaauuugaaaauuucaaauuuuuguccaaaccuaCUGAAGUGUUUGGGGGAACUCucggugaca
((((((((((((((((((((((((.(((....((((((((((((((...)))))))))...)))))..))).))))))))))))))))))))).)))....

Structure

----   -                     U   aaaa     ---         a 
    acu agaGUUCCCUUGAGCACUUCA UGg    uugga   aaauuugaa  
    ||| ||||||||||||||||||||| |||    |||||   ||||||||| a
    ugg uCUCAAGGGGGUUUGUGAAGU auc    aaccu   uuuaaacuu  
acag   c                     C   --ca     guu         u 

Annotation confidence High

Genome context

Unknown

Mature cme-miR395a-5p

• Accession: MIMAT0057880
• Description: Cucumis melo cme-miR395a-5p mature miRNA
• Sequence: 7 - GUUCCCUUGAGCACUUCAUUG - 27
• Evidence: experimental ; unknown

Mature cme-miR395a-3p

• Accession: MIMAT0026141
• Description: Cucumis melo cme-miR395a-3p mature miRNA
• Sequence: 72 - CUGAAGUGUUUGGGGGAACUC - 92
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877