Stem-loop cme-MIR395e

Accession

MI0023246

Description

Cucumis melo cme-MIR395e precursor miRNA

Sequence

2273 reads, 1405.0 reads per million, 25 experiments

ucuugaGUUCCCUUCCAAGCACUUCAGAAGAaacaacaaccauuucuagucacaaaauuuugugauguguacuuuacaaCUGAAGUGUUUGGGGGAACUCuagaagauac
(((.((((((((..(((((((((((((.(((((.........))))).(((((((....)))))))(((.....)))..))))))))))))))))))))).)))......

Structure

------   u        UU             -------------------------------A     caa 
      ucu gaGUUCCC  CCAAGCACUUCAG                                AGAaa   c
      ||| ||||||||  |||||||||||||                                |||||   a
      aga CUCAAGGG  GGUUUGUGAAGUC                                ucuuu   a
cauaga   u        --             aacauuucauguguaguguuuuaaaacacuga     acc 

Annotation confidence High

Genome context

Unknown

Mature cme-miR395e-5p

• Accession: MIMAT0057881
• Description: Cucumis melo cme-miR395e-5p mature miRNA
• Sequence: 7 - GUUCCCUUCCAAGCACUUCAGAAGA - 31
• Evidence: experimental ; unknown

Mature cme-miR395e-3p

• Accession: MIMAT0026142
• Description: Cucumis melo cme-miR395e-3p mature miRNA
• Sequence: 80 - CUGAAGUGUUUGGGGGAACUC - 100
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877