Stem-loop cme-MIR396d

Accession

MI0023251

Description

Cucumis melo cme-MIR396d precursor miRNA

Sequence

gccaugcuuUUCCACAGCUUUCUUGAACUUucucugcucuucccuucuucucacaaucaauuuuguaaguaaaaucucucuuagauuuuacccaaaaguuaaauuuaaaaaaaaaaaaaaagaaacuuuggaaguucaagaaagcugugggagaacauggca
((((((.(((((((((((((((((((((((((....................((((......))))..(((((((((.....)))))))))...((((((.......................))))))))))))))))))))))))))))))).)))))).

Structure

-      c                         --ucugcucuucccuucuucucacaaucaauuuuguaa         c 
 gccaug uuUUCCACAGCUUUCUUGAACUUuc                                      guaaaaucu u
 |||||| |||||||||||||||||||||||||                                      ||||||||| c
 cgguac agagggugucgaaagaacuugaagg                                      cauuuuaga u
a      a                         uuucaaagaaaaaaaaaaaaaaauuuaaauugaaaacc         u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR396d

• Accession: MIMAT0026147
• Description: Cucumis melo cme-miR396d mature miRNA
• Sequence: 10 - UUCCACAGCUUUCUUGAACUU - 30
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877