Stem-loop cme-MIR395b

Accession

MI0023261

Description

Cucumis melo cme-MIR395b precursor miRNA

Sequence

835 reads, 901.0 reads per million, 26 experiments

ccUAGAGUUUCCCUGAACAACUUCAucuaggcgagaauuuuaauaaugcuuucuuagaUUGAAGUGUUUGGGGGAACUCuuggugucaa
((.((((((((((((((((.(((((((((((.(((.(((.....))).))).)))))).))))))))))))))))))))).))......

Structure

------  U                A     -      c   a   u 
      cc AGAGUUUCCCUGAACA CUUCA ucuagg gag auu u
      || |||||||||||||||| ||||| |||||| ||| ||| a
      gg uCUCAAGGGGGUUUGU GAAGU agauuc uuc uaa a
aacugu  u                -     U      u   g   u 

Annotation confidence Low

Genome context

Unknown

Mature cme-miR395b-5p

• Accession: MIMAT0057892
• Description: Cucumis melo cme-miR395b-5p mature miRNA
• Sequence: 3 - UAGAGUUUCCCUGAACAACUUCA - 25
• Evidence: experimental ; unknown

Mature cme-miR395b-3p

• Accession: MIMAT0026157
• Description: Cucumis melo cme-miR395b-3p mature miRNA
• Sequence: 59 - UUGAAGUGUUUGGGGGAACUC - 79
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877