Stem-loop cme-MIR828

Accession

MI0023265

Description

Cucumis melo cme-MIR828 precursor miRNA

Sequence

uugcaauguuUCUUGCUCAAAUGAGUAUUCCAagucgcaccagcaaaugucaaaaugcaaacuaaugcauauuuuggugcuuguuuuugccaugcuaauuugaguaagaaauguugcaa
.(((((((((((((((((((((.(((((..((((..(((((((........((.(((((......))))).))))))))).....))))..))))).))))))))))))))))))))).

Structure

u                     G     UC    ---uc       caaauguc  a     aa 
 ugcaauguuUCUUGCUCAAAU AGUAU  CAag     gcaccag        aa augca  c
 ||||||||||||||||||||| |||||  ||||     |||||||        || |||||   
 acguuguaaagaaugaguuua ucgua  guuu     cgugguu        uu uacgu  u
a                     a     cc    uuguu       --------  a     aa 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR828

• Accession: MIMAT0026161
• Description: Cucumis melo cme-miR828 mature miRNA
• Sequence: 11 - UCUUGCUCAAAUGAGUAUUCCA - 32
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877