Stem-loop cme-MIR166g

Accession

MI0023269

Description

Cucumis melo cme-MIR166g precursor miRNA

Literature search

1 open access papers mention cme-MIR166g
(6 sentences)

Sequence

41748 reads, 17722.0 reads per million, 26 experiments

ugaugGGAAUGUUGUUUGGCUCGAGGuucauauauaucaaacuauaucaaauuuuuuggauaaagaaaaaggguuguuguuggauuguuaaauauauaaucUCGGACCAGGCUUCAUUCCCgucaaccaa
(((((((((((..((((((.((((((((.((((((..(((.(((((.(((.((((((........))))))..))).)).))).)))....)))))))))))))).))))))..))))))))))).....

Structure

-----           UU      C        c      --au   a   -  u   -a      gga 
     ugaugGGAAUG  GUUUGG UCGAGGuu auauau    caa cua ua caa  uuuuuu   u
     |||||||||||  |||||| |||||||| ||||||    ||| ||| || |||  ||||||    
     acugCCCUUAC  CGGACC GGCUcuaa uauaua    guu ggu gu guu  gaaaaa   a
aacca           UU      A        -      aauu   a   u  u   gg      gaa 

Annotation confidence High

Genome context

Unknown

Mature cme-miR166g-5p

• Accession: MIMAT0057897
• Description: Cucumis melo cme-miR166g-5p mature miRNA
• Sequence: 6 - GGAAUGUUGUUUGGCUCGAGG - 26
• Evidence: experimental ; unknown

Mature cme-miR166g-3p

• Accession: MIMAT0026165
• Description: Cucumis melo cme-miR166g-3p mature miRNA
• Sequence: 102 - UCGGACCAGGCUUCAUUCCC - 121
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877