Stem-loop cme-MIR395c

Accession

MI0023274

Description

Cucumis melo cme-MIR395c precursor miRNA

Sequence

828 reads, 854.0 reads per million, 26 experiments

cuuagAGUUUCCCUGAACAACUUCACCuagacaagaauuuuuauaaugcuuucuuagaUUGAAGUGUUUGGGGGAACUCuuggugucaa
((.((((((((((((((((.(((((.(((((.(((.(((.....))).))))).)))..))))))))))))))))))))).))......

Structure

------  u                A     -C   -  c   a   u 
      cu agAGUUUCCCUGAACA CUUCA  Cua ga aag auu u
      || |||||||||||||||| |||||  ||| || ||| ||| u
      gg uCUCAAGGGGGUUUGU GAAGU  gau cu uuc uaa a
aacugu  u                -     Ua   u  -   g   u 

Annotation confidence High

Genome context

Unknown

Mature cme-miR395c-5p

• Accession: MIMAT0057899
• Description: Cucumis melo cme-miR395c-5p mature miRNA
• Sequence: 6 - AGUUUCCCUGAACAACUUCACC - 27
• Evidence: experimental ; unknown

Mature cme-miR395c-3p

• Accession: MIMAT0026170
• Description: Cucumis melo cme-miR395c-3p mature miRNA
• Sequence: 59 - UUGAAGUGUUUGGGGGAACUC - 79
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877