Stem-loop cme-MIR399g

Accession

MI0023289

Description

Cucumis melo cme-MIR399g precursor miRNA

Sequence

15923 reads, 5703.0 reads per million, 22 experiments

AGGGCUUCUCUCCAUUGGCAGGcauaaugacuuagacuuucauguucUGCCAAAGGAGAGUUGCCCUUC
(((((..((((((.((((((((....((((.........))))..)))))))).))))))..)))))..

Structure

--     UU      A        caua    cuu 
  AGGGC  CUCUCC UUGGCAGG    auga   a
  |||||  |||||| ||||||||    ||||   g
  UCCCG  GAGAGG AACCGUcu    uacu   a
CU     UU      A        --ug    uuc 

Annotation confidence High

Genome context

Unknown

Mature cme-miR399g-5p

• Accession: MIMAT0026185
• Description: Cucumis melo cme-miR399g-5p mature miRNA
• Sequence: 1 - AGGGCUUCUCUCCAUUGGCAGG - 22
• Evidence: experimental ; Illumina [1]

Mature cme-miR399g-3p

• Accession: MIMAT0057903
• Description: Cucumis melo cme-miR399g-3p mature miRNA
• Sequence: 48 - UGCCAAAGGAGAGUUGCCCUUC - 69
• Evidence: experimental ; unknown

References

1. PubMed ID: 22375710
   Cucumis melo microRNA expression profile during aphid herbivory in a resistant and susceptible interaction
   "Sattar S, Song Y, Anstead JA, Sunkar R, Thompson GA"
   "Mol Plant Microbe Interact (2012) 25:839-848