miRBase entry: cme-MIR399g

Stem-loop cme-MIR399g


Accession
MI0023289
Description
Cucumis melo cme-MIR399g precursor miRNA
Gene family
MIPF0000015; MIR399


Sequence

AGGGCUUCUCUCCAUUGGCAGGcauaaugacuuagacuuucauguucugccaaaggagaguugcccuuc
(((((..((((((.((((((((....((((.........))))..)))))))).))))))..)))))..

Structure
--     UU      A        caua    cuu 
  AGGGC  CUCUCC UUGGCAGG    auga   a
  |||||  |||||| ||||||||    ||||   g
  ucccg  gagagg aaccgucu    uacu   a
cu     uu      a        --ug    uuc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature cme-miR399g

Accession MIMAT0026185
Description Cucumis melo cme-miR399g mature miRNA
Sequence 1 - AGGGCUUCUCUCCAUUGGCAGG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22375710
    Cucumis melo microRNA expression profile during aphid herbivory in a resistant and susceptible interaction
    "Sattar S, Song Y, Anstead JA, Sunkar R, Thompson GA"
    "Mol Plant Microbe Interact (2012) 25:839-848