Stem-loop cme-MIR156j

Accession

MI0023290

Description

Cucumis melo cme-MIR156j precursor miRNA

Literature search

2 open access papers mention cme-MIR156j
(5 sentences)

Sequence

13065 reads, 5634.0 reads per million, 24 experiments

GUUGACAGAAGAGAGUGAGCACacagaggcuuuugguauaauaauaugccauugcucuugugUGCUCACUUCUCUUUCUGUCAGuuu
.(((((((((((((((((((((((((.(((...(((((((....)))))))..))).)))))))))))).)))).)))))))))...

Structure

--G         -    -            a   uuu       a 
   UUGACAGAA GAGA GUGAGCACacag ggc   ugguaua u
   ||||||||| |||| |||||||||||| |||   |||||||  
   GACUGUCUU CUCU CACUCGUguguu ucg   accguau a
uuu         U    U            c   -uu       a 

Annotation confidence Medium

Genome context

Unknown

Mature cme-miR156j-5p

• Accession: MIMAT0026186
• Description: Cucumis melo cme-miR156j-5p mature miRNA
• Sequence: 1 - GUUGACAGAAGAGAGUGAGCAC - 22
• Evidence: experimental ; Illumina [1]

Mature cme-miR156j-3p

• Accession: MIMAT0057904
• Description: Cucumis melo cme-miR156j-3p mature miRNA
• Sequence: 63 - UGCUCACUUCUCUUUCUGUCAG - 84
• Evidence: experimental ; unknown

References

1. PubMed ID: 22375710
   Cucumis melo microRNA expression profile during aphid herbivory in a resistant and susceptible interaction
   "Sattar S, Song Y, Anstead JA, Sunkar R, Thompson GA"
   "Mol Plant Microbe Interact (2012) 25:839-848