Stem-loop bma-mir-5859

Accession

MI0023458

Description

Brugia malayi bma-mir-5859 precursor miRNA

Sequence

aagucuuaacUUAGGAAUUGUUGGAGAUCGGCUUcuuuguuucggauuccugauuuccaacaauuucuuauuuuugauuuu
(((((..((...(((((((((((((((((((..(((.......)))..)).)))))))))))))))))...))..))))).

Structure

-     uu  cUU                 -  CU   uu 
 aaguc  aa   AGGAAUUGUUGGAGAUC GG  Ucu  g
 |||||  ||   ||||||||||||||||| ||  |||  u
 uuuag  uu   ucuuuaacaaccuuuag cc  agg  u
u     uu  uau                 u  uu   cu 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold8: 1096279-1096359 [+]

Mature bma-miR-5859

• Accession: MIMAT0026358
• Description: Brugia malayi bma-miR-5859 mature miRNA
• Sequence: 11 - UUAGGAAUUGUUGGAGAUCGGCUU - 34
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4