Stem-loop bma-mir-5873

Accession

MI0023480

Description

Brugia malayi bma-mir-5873 precursor miRNA

Sequence

auagauagcaUAGAUGUUGUUCUGAUUGACugauagagcagguaggcuucaaaguaauguuaauguuauggag
....(((((((.(((((((((.(((....(((......))).......))).))))))))).)))))))....

Structure

auag       A         C   ---UUGA   au 
    auagcaU GAUGUUGUU UGA       Cug  a
    ||||||| ||||||||| |||       |||   
    uauugua uuguaauga acu       gac  g
gagg       a         a   ucggaug   ga 

Annotation confidence Low

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold21: 169704-169776 [-]

Mature bma-miR-5873

• Accession: MIMAT0026372
• Description: Brugia malayi bma-miR-5873 mature miRNA
• Sequence: 11 - UAGAUGUUGUUCUGAUUGAC - 30
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4