Accession
MI0023507
Description
Sorghum bicolor
sbi-MIR5564c precursor miRNA
Sequence
5733759
reads,
86400.0
reads per million, 50 experiments
gguuccggagcuggccuguccUGGGAAGCAAUUCGUCGAACAgcugcagcgcgagacggugguaggcccucagccucgaccacgcgcacgcgagcugUUUGGCGAAUUGCUUUACCCAUGUcaggcccugccucgguuauauuauacggccuucaacc
((((((((.((.((((((.(.((((((((((((((((((((((((((.(((((....(((.(.((((.....))))).))).)))))..)).))))))))))))))))))))..)))).).))))))..)).))))...........)))).......
((((((((.((.((((((.(.((((((((((((((((((((((((((.(((((....(((.(.((((.....))))).))).)))))..)).))))))))))))))))))))..)))).).))))))..)).))))...........)))).......
Structure
------- ----------- a -u u c -- - -a agac g u c
gguu ccgg gc ggccug c UGGG AAGCAAUUCGUCGAACAgcu gc gcgcg ggu g aggc c
|||| |||| || |||||| | |||| |||||||||||||||||||| || ||||| ||| | |||| u
ccgg ggcu cg ccggac G ACCC UUCGUUAAGCGGUUUgucga cg cgcgc cca c uccg c
ccaacuu cauauuauauu c uc U U AU g ca ---a g - a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 69704231-69704388 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sbi-MIR5564c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sbi-miR5564c-5p
| Accession | MIMAT0026390 |
| Description | Sorghum bicolor sbi-miR5564c-5p mature miRNA |
| Sequence | 22 - UGGGAAGCAAUUCGUCGAACA - 42 |
| Evidence | not_experimental |
Mature sbi-miR5564c-3p
| Accession | MIMAT0026391 |
| Description | Sorghum bicolor sbi-miR5564c-3p mature miRNA |
| Sequence | 98 - UUUGGCGAAUUGCUUUACCCAUGU - 121 |
| Evidence | not_experimental |
References
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