Accession
MI0023507
Description
Sorghum bicolor
sbi-MIR5564c precursor miRNA
Sequence
gguuccggagcuggccuguccugggaagcAAUUCGUCGAACAGCUGCAGCgcgagacggugguaggcccucagccucgaccacgcgcACGCGAGCUGUUUGGCGAAUUgcuuuacccaugucaggcccugccucgguuauauuauacggccuucaacc
((((((((.((.((((((.(.((((((((((((((((((((((((((.(((((....(((.(.((((.....))))).))).)))))..)).))))))))))))))))))))..)))).).))))))..)).))))...........)))).......
((((((((.((.((((((.(.((((((((((((((((((((((((((.(((((....(((.(.((((.....))))).))).)))))..)).))))))))))))))))))))..)))).).))))))..)).))))...........)))).......
Structure
------- ----------- a -u u c -- - -A agac g u c
gguu ccgg gc ggccug c uggg aagcAAUUCGUCGAACAGCU GC GCgcg ggu g aggc c
|||| |||| || |||||| | |||| |||||||||||||||||||| || ||||| ||| | |||| u
ccgg ggcu cg ccggac g accc uucgUUAAGCGGUUUGUCGA CG cgcgc cca c uccg c
ccaacuu cauauuauauu c uc u u au G CA ---a g - a
Annotation confidence
Not enough data
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Genome context
chr5: 69704231-69704388 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sbi-MIR5564c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sbi-miR5564c-5p
| Accession | MIMAT0026390 |
| Description | Sorghum bicolor sbi-miR5564c-5p mature miRNA |
| Sequence | 30 - AAUUCGUCGAACAGCUGCAGC - 50 |
| Evidence | not_experimental |
Mature sbi-miR5564c-3p
| Accession | MIMAT0026391 |
| Description | Sorghum bicolor sbi-miR5564c-3p mature miRNA |
| Sequence | 88 - ACGCGAGCUGUUUGGCGAAUU - 108 |
| Evidence | not_experimental |
References
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