Stem-loop sbi-MIR6224a

Accession

MI0023520

Description

Sorghum bicolor sbi-MIR6224a precursor miRNA

Sequence

acuccCUCCGUCCUAAUAUAUAAGGCguaaccacuuuuuaaucauguccuauaauacaaagcgugcccucucacagacauuaaugcaguaguacuagugcugagagagaaaauuaaaugcguucuuggucuuugaaccagaggugguuaugcCUUAUAUACUAGGACGGAGGGagu
(((((((((((((((.((((((((((((((((((((((...(((.(.((...(((.((.........(((((.(((.(((((.(((....))).)))))))).))))).........)).)))...)).)..)))...)))))))))))))))))))))).)))))))))))))))

Structure

               A                      uaa   -u u  uau   a  aagcgugcc     a   a     a   a 
acuccCUCCGUCCUA UAUAUAAGGCguaaccacuuuu   uca  g cc   aau ca         cucuc cag cauua ugc g
||||||||||||||| ||||||||||||||||||||||   |||  | ||   ||| ||         ||||| ||| ||||| |||  
ugaGGGAGGCAGGAU AUAUAUUCcguauugguggaga   agu  c gg   uug gu         gagag guc gugau aug u
               C                      cca   uu u  uuc   c  aaauuaaaa     a   -     c   a 

Annotation confidence Not enough data

Genome context

chr1: 30488899-30489074 [-]

Mature sbi-miR6224a-5p

• Accession: MIMAT0026414
• Description: Sorghum bicolor sbi-miR6224a-5p mature miRNA
• Sequence: 6 - CUCCGUCCUAAUAUAUAAGGC - 26
• Evidence: not_experimental

Mature sbi-miR6224a-3p

• Accession: MIMAT0026415
• Description: Sorghum bicolor sbi-miR6224a-3p mature miRNA
• Sequence: 153 - CUUAUAUACUAGGACGGAGGG - 173
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290