Stem-loop sbi-MIR6224b

Accession

MI0023521

Description

Sorghum bicolor sbi-MIR6224b precursor miRNA

Sequence

cucuCUCCGUCCUAAUAUAUAAGGCgcaaucacuuuuuauuuauaucccauaauauaauagcucucucucauacaucaauacaguaguacuaguauugagagagaauuaaauaugaucuugauuuuugaaccaaagguaguuaagcCUUAUAUACUAGGACGGAGGGag
((((((((((((((.((((((((((..(((.((((((..((((.(((.....((((..(((.((((((((((((.....(((....)))...))).))))))))).))).))))......)))...))))..)))))).)))..)))))))))).))))))))))))))

Structure

              A          gc   c      ua    --u   -ccaua    aa   c         -   aucaa   a 
cucuCUCCGUCCUA UAUAUAAGGC  aau acuuuu  uuua   auc      auau  uag ucucucuca uac     uac g
|||||||||||||| ||||||||||  ||| ||||||  ||||   |||      ||||  ||| ||||||||| |||     |||  
gaGGGAGGCAGGAU AUAUAUUCcg  uug uggaaa  aagu   uag      uaua  auu agagagagu aug     aug u
              C          aa   a      cc    uuu   uucuag    -a   a         u   --auc   a 

Annotation confidence Not enough data

Genome context

chr4: 279105-279273 [-]

Mature sbi-miR6224b-5p

• Accession: MIMAT0026416
• Description: Sorghum bicolor sbi-miR6224b-5p mature miRNA
• Sequence: 5 - CUCCGUCCUAAUAUAUAAGGC - 25
• Evidence: not_experimental

Mature sbi-miR6224b-3p

• Accession: MIMAT0026417
• Description: Sorghum bicolor sbi-miR6224b-3p mature miRNA
• Sequence: 147 - CUUAUAUACUAGGACGGAGGG - 167
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290