Stem-loop sbi-MIR6228

Accession

MI0023529

Description

Sorghum bicolor sbi-MIR6228 precursor miRNA

Sequence

gcaguUUCUAUCUCUAUUAAUUGUGUUGCcaacucaccauuuugcugcuGUGGCAGUAGAAUUAAUGAAGGGAgagagugc
(((.(((((.(((.((((((((.((((((((...((.((...)).))...)))))))).)))))))).))).))))).)))

Structure

   g     A   C        G        acu  c  u 
gca uUUCU UCU UAUUAAUU UGUUGCca   ca ca  
||| ||||| ||| |||||||| ||||||||   || || u
cgu agagA GGA GUAAUUAA AUGACGGU   gu gu  
   g     G   A        G        Guc  c  u 

Annotation confidence Not enough data

Genome context

chr2: 64495066-64495146 [-]

Mature sbi-miR6228-5p

• Accession: MIMAT0026432
• Description: Sorghum bicolor sbi-miR6228-5p mature miRNA
• Sequence: 6 - UUCUAUCUCUAUUAAUUGUGUUGC - 29
• Evidence: not_experimental

Mature sbi-miR6228-3p

• Accession: MIMAT0026433
• Description: Sorghum bicolor sbi-miR6228-3p mature miRNA
• Sequence: 50 - GUGGCAGUAGAAUUAAUGAAGGGA - 73
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290