Stem-loop sbi-MIR6233

Accession

MI0023537

Description

Sorghum bicolor sbi-MIR6233 precursor miRNA

Sequence

cacagaugcaacuagccacuggugaUGUUGAGGCUGGAGCGAAACUCGGugaaggucgaggacgggagacccuuggugaagauguuggccCAAGUUUGGUUUUGGUAAUUAAUGacaccaaguugcuaaugcuuugug
((((((.(((..((((.(((((((..(((((.((((((((.(((((.(((.((.(((.....((((.....)))).....))).)).)))..))))).))))))))..)))))..)))).))).)))).)))))))))

Structure

      u   ac    c   -    aU     -G        G     -C   g  g   gagga    a 
cacaga gca  uagc acu ggug  GUUGA  GCUGGAGC AAACU  GGu aa guc     cggg g
|||||| |||  |||| ||| ||||  |||||  |||||||| |||||  ||| || |||     |||| a
guguuu cgu  aucg uga ccac  UAAUU  UGGUUUUG UUUGA  ccg uu uag     guuc c
      -   -a    u   a    aG     AA        G     AC   g  g   aagug    c 

Annotation confidence Not enough data

Genome context

chr4: 19698132-19698269 [+]

Mature sbi-miR6233-5p

• Accession: MIMAT0026448
• Description: Sorghum bicolor sbi-miR6233-5p mature miRNA
• Sequence: 26 - UGUUGAGGCUGGAGCGAAACUCGG - 49
• Evidence: not_experimental

Mature sbi-miR6233-3p

• Accession: MIMAT0026449
• Description: Sorghum bicolor sbi-miR6233-3p mature miRNA
• Sequence: 91 - CAAGUUUGGUUUUGGUAAUUAAUG - 114
• Evidence: not_experimental

References

1. PubMed ID: 22747909
   Computational identification and analysis of novel sugarcane microRNAs
   Thiebaut F, Grativol C, Carnavale-Bottino M, Rojas CA, Tanurdzic M, Farinelli L, Martienssen RA, Hemerly AS, Ferreira PC
   BMC Genomics (2012) 13:290