Stem-loop ipu-mir-301a

Accession

MI0024611

Description

Ictalurus punctatus ipu-mir-301a precursor miRNA

Sequence

ucugacuucauugcacuacuguauuggacagcuagCAGUGCAAUAGUAUUGUCAAAGC
..((((..(((((((((.((((........)).)).)))))))).)....))))....

Structure

--uc    --uu -        a  -  auu 
    ugac    c auugcacu cu gu   g
    ||||    | |||||||| || ||    
    ACUG    G UAACGUGA ga cg   g
CGAA    UUAU A        C  u  aca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-301a

• Accession: MIMAT0029494
• Description: Ictalurus punctatus ipu-miR-301a mature miRNA
• Sequence: 36 - CAGUGCAAUAGUAUUGUCAAAGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174