Stem-loop ipu-mir-457b

Accession

MI0024713

Description

Ictalurus punctatus ipu-mir-457b precursor miRNA

Literature search

1 open access papers mention ipu-mir-457b
(2 sentences)

Sequence

UAGCAGCACAUCAAUAUUGGCAgcugcccucucccuggguugccaguauguuuugugcugcuccu
.(((((((((...(((((((((...((((.......)))))))))))))....)))))))))...

Structure

--U         -UCA         gcu    uc 
   AGCAGCACA    AUAUUGGCA   gccc  u
   |||||||||    |||||||||   ||||  c
   ucgucgugu    uaugaccgu   uggg  c
ucc         uuug         ---    uc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-457b

• Accession: MIMAT0029577
• Description: Ictalurus punctatus ipu-miR-457b mature miRNA
• Sequence: 1 - UAGCAGCACAUCAAUAUUGGCA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174