miRBase entry: cbn-mir-73a

Stem-loop cbn-mir-73a

Accession

MI0024881

Description

Caenorhabditis brenneri cbn-mir-73a precursor miRNA

Sequence

ugagcuuccacaucagaccacagcuauucacaaaaaaaaugcUGGCAAGAUGUAGGCAGUUCAGU
((((((.(((((((......((((................))))....))))).)).))))))..

Structure

--      u  -     agacca    uauucac 
  ugagcu cc acauc      cagc       a
  |||||| || |||||      ||||        
  ACUUGA GG UGUAG      GUcg       a
UG      C  A     --AACG    uaaaaaa

Annotation confidence Not enough data

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Genome context

Cbre_Contig0: 1030713-1030777 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cbn-mir-73a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbn-miR-73a

Accession	MIMAT0029715
Description	Caenorhabditis brenneri cbn-miR-73a mature miRNA
Sequence	43 - UGGCAAGAUGUAGGCAGUUCAGU - 65
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508